MDAxtarish is a personal workspace providing standard protocols to prepare structures, run standard molecular dynamics simulations and to analyze trajectories.

AxtarishGro is a fully automated online tool for performing molecular dynamics simulation of macromolecules (proteins) alone or in complex with ligands (small ...

The GROMACS Molecular Dynamics online webserver allows anybody with a Neurosnap account to run and access GROMACS Molecular Dynamics, no downloads required.

22 мар. 2023 г. · A WEB tool developed to automate biological simulations performed in Gromacs using a graphical interface to make molecular dynamics simulation user-friendly ...

This web app simulates the dynamics of simple atoms and molecules in a two-dimensional universe.

25 февр. 2022 г. · I need to run molecular dynamic simulation for a protein-protein complex which i obtain from HADDOCK server. Are there any web servers which ...

The Coarse-grained Molecular dynamics (CGMD) platform is a publicly available web server for preparing and running coarse-grained molecular dynamics ...

LAMMPS is a classical molecular dynamics code with a focus on materials modeling. It's an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. Download LAMMPS · LAMMPS documentation · LAMMPS Tutorials · Picture gallery

Продолжительность: 16:13
Опубликовано: 25 янв. 2023 г.

VMD is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting. Molecular representations · Download VMD · VMD 1.9.4 · VMD 1.9.3 Documentation