The PlasmidFinder service contains one python script plasmidfinder.py which is the script of the latest version of the PlasmidFinder service.

PlasmidFinder identifies plasmids in total or partial sequenced isolates of bacteria. Contact Jeevan in slack if you have any issues or further assistance ...

Bringing order to bacterial sequence data. Contribute to AlexOrlek/bacterialBercow development by creating an account on GitHub.

plasmidfinder.tsv : A tabular file of each AMR plasmid type and additional BLAST information from the PlasmidFinder database, one plasmid type per line.

Bactopia Tool - plasmidfinder ¶. The ectyper module used ECTyper to conduct in silico prediction of serotype for Escherichia coli genomes.

Short Read Sequence Typing for Bacterial Pathogens - srst2/data/PlasmidFinder.fasta at master · katholt/srst2.

PlasmidFinder allows identification of plasmids in total or partial sequenced isolates of bacteria.

genomicepidemiology/plasmidfinder.git · Flag notifications · Supercharge development with Bitbucket & Atlassian Cloud.

8 мая 2022 г. · The help menu of the plasmidfinder shows a different method of installation (using docker) which must be in the git readme file not after ...

Apache-2.0 PlasmidFinder allows identification of plasmids in total or partial sequenced isolates of bacteria.