EPDnew is a collection of databases of experimentally validated promoters for selected model organisms. Evidence comes from TSS-mapping from high-throughput ...

The program is designed for scanning sequneces of putative or experimentally determined promoter regions. The application is not suitable as a predictive tool ...

A tool to scan for canonical core promoter elements - BREs, TATA boxes, INRs and DPEs, and synergistics combinations of these elements (more). The search ...

It provides information about eukaryotic promoters available in the EMBL Data Library and is intended to assist experimental researchers, as well as computer ...

Promoter2.0 predicts transcription start sites of vertebrate PolII promoters in DNA sequences. It has been developed as an evolution of simulated ...

PhagePromoter - is a tool for locating promoters in phage genomes, using machine learning methods. This is the first online tool for predicting promoters that ...

Enter a DNA sequence to find possible transcription promoters ... Please be patient--promoter prediction takes about 10 seconds per kilobase. Training set: Our ...

13 июл. 2023 г. · In eukaryotic promoter prediction, the promoter sequences are usually categorized into TATA-containing types (i.e., promoter sequences with the ...

11 янв. 2022 г. · We collected the training sequences from all available predictors for analyzing the length distribution of prokaryotic and eukaryotic promoters, ...

In this work, we propose a robust deep learning model, called DeePromoter, to analyze the characteristics of the short eukaryotic promoter sequences, and ...