All four scoring functions have been integrated into our Fast Fourier Transform based docking algorithm ZDOCK, which is freely available to academic users at ...

Similar to other docking algorithms, ZDOCK performs best on the enzyme-inhibitor category of test cases, com- pared with antibody-antigen and others. This ...

We have developed several protein docking algorithms. These include: ZDOCK: Performs a full rigid-body search of docking orientations between two proteins. The ...

It uses the Fast Fourier Transform algorithm to enable an efficient global docking search on a 3D grid, and utilizes a combination of shape complementarity, ...

14 мая 2003 г. · Here we present a new scoring function for the initial stage of unbound docking. It combines our recently developed pairwise shape complementarity with ...

22 окт. 2024 г. · ZDOCK [103] is a rigid protein docking program that performs a thorough search for probable binding modes of two-component proteins using FFT.

13 июл. 2021 г. · M-ZDOCK is a program for predicting the structure of a radially symmetric multimer based on the structure of a subunit.

A new scoring function for the initial stage of unbound docking is presented that combines the recently developed pairwise shape complementarity with ...

ZDOCK is an initial stage docking algorithm designed to predict the structure of the complex of two proteins, referred to as the receptor and the ligand. It ...

AbstractThe development of scoring functions is of great importance to protein docking. Here we present a new scoring function for the initial stage of ...