The final column is the ZDOCK score (see the references for more on the ZDOCK scoring function). The predictions are sorted by ZDOCK score, with the ... |
Scoring Functions. Two ZDOCK versions are available for use on the server, with scoring functions consisting of these terms: ZDOCK 3.0.2: IFACE Statistical ... |
... scoring. ZDOCK achieves high predictive accuracy on protein–protein docking benchmarks, with >70% success in the top 1000 predictions for rigid-body cases ... |
Zdock uses a rather simplistic scoring function, so there is no bindng energy and it can't be directly derived from the zdock score. Read more about zdock ... |
The scoring function is an energy-based scoring function, which calculates potential energy, spatial complementarity, and electric field force. Tutorial. (1) ... |
21 мар. 2015 г. · The docking score is in the output file (text file) produced by zdock. It's the last column starting from row 6; the first five rows are ... |
It can be used to perform transformations on PDB structures based on ZDOCK predictions, generate multimers from M-ZDOCK output, constraint based filtering, and ... |
Here we present a new scoring function for the initial stage of unbound docking. It combines our recently developed pairwise shape complementarity with ... |
4 июн. 2014 г. · The output of ZDOCK is explained here. The explanation on the scoring functions, how the models are deemed 'good', is here. |
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