ZDOCK 3.0.2's scoring function is shown to have superior predictive performance versus ZDOCK 2.3.2 using an unbound protein docking benchmark of 176 test ...

The scoring function is an energy-based scoring function, which calculates potential energy, spatial complementarity, and electric field force.

The development of scoring functions is of great importance to protein docking. Here we present a new scoring function for the initial stage of unbound docking.

The final column is the ZDOCK score (see the references for more on the ZDOCK scoring function). The predictions are sorted by ZDOCK score, with the ...

The scoring functions of both ZDOCK and ZRANK are of atomic resolution. Atom-based potentials can be more accurate than residue-based potentials on high ...

Zdock uses a rather simplistic scoring function, so there is no bindng energy and it can't be directly derived from the zdock score. Read more about zdock ...

20 окт. 2021 г. · In this study, we compare several CONSRANK-like scoring functions on large sets of docking poses generated by ZDOCK, including CONSRANK. We then ...

28 дек. 2017 г. · ZDOCK systematically evaluates a huge number of docked conformations on a grid by using a combination of shape complementarity, electrostatics ...

Our goal is to identify the scoring function that performs best for the initial stage of unbound docking, which entails ranking as many near-native structures ...

21 мар. 2015 г. · Zdock uses a rather simplistic scoring function, so there is no bindng energy and it can't be directly derived from the zdock score. Read more ...